Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 EGFEM1P-202ENST00000431685 1563 ntBASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AL845331.1-201ENST00000424978 1190 ntBASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 KRT17P6-201ENST00000453795 1220 ntBASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AC019129.2-201ENST00000609837 1235 ntBASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LIN7CQ9NUP9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 MINOS1P3-201ENST00000457048 203 ntBASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 AC074051.2-201ENST00000565115 352 ntBASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 MIR3652-201ENST00000579335 131 ntBASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms