Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 PRORSD1P-201ENST00000295112 541 ntBASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 EGLN1P1-201ENST00000531623 762 ntBASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 MIR4785-201ENST00000585005 73 ntBASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 AC024563.2-201ENST00000603282 481 ntBASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SND1-IT1Q9HBX3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SND1-IT1Q9HBX3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 AP000523.1-201ENST00000398242 1049 ntBASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 AL139327.4-201ENST00000612362 153 ntBASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms