Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC069148.1-201ENST00000608741 768 ntBASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 AC091076.1-201ENST00000610741 619 ntBASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 NPAP1P7-201ENST00000613027 823 ntBASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 AC004817.3-201ENST00000602957 2129 ntBASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 AC079328.2-201ENST00000561241 3354 ntBASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 NUS1P2-201ENST00000417358 873 ntBASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 MIR5100-201ENST00000579544 119 ntBASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 AC018695.7-201ENST00000624587 2492 ntBASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 AL645728.1-201ENST00000366221 2101 ntBASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRTM1Q9HBL6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 LINC00982-205ENST00000420957 435 ntBASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AC073592.4-201ENST00000623827 446 ntBASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AL358472.4-201ENST00000633140 710 ntBASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.38■□□□□ 0.21
LRTM1Q9HBL6 AC079776.2-201ENST00000641154 1609 ntBASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms