Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC015656.1-201ENST00000624209 3578 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 KRT17P3-201ENST00000420566 1262 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 FAM207BP-201ENST00000447172 505 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 MTDHP1-201ENST00000605323 784 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AL353708.3-201ENST00000610272 989 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC116407.2-201ENST00000613639 860 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC011298.2-201ENST00000617989 482 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AC023157.3-201ENST00000619086 2088 ntBASIC13.83□□□□□ -0.2
NKX6-2Q9C056 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 KRT8P9-201ENST00000558927 1449 ntBASIC13.82□□□□□ -0.2
NKX6-2Q9C056 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 AL162430.1-201ENST00000480705 870 ntBASIC13.82□□□□□ -0.2
NKX6-2Q9C056 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-2Q9C056 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AL122018.1-201ENST00000446607 2310 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 AC079781.5-202ENST00000641784 3743 ntBASIC13.81□□□□□ -0.2
NKX6-2Q9C056 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-2Q9C056 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms