Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TNRC18P3-201ENST00000441896 2691 ntBASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 AC080080.1-201ENST00000625121 2420 ntBASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 AC084018.2-201ENST00000613093 2607 ntBASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP3Q9BWW4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 HCG4B-203ENST00000450128 991 ntBASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SSBP3Q9BWW4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.21□□□□□ -0.14
SSBP3Q9BWW4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms