Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 HMGN1P19-201ENST00000436976 333 ntBASIC19.75■□□□□ 0.75
SLF1Q9BQI6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 AC112191.1-201ENST00000523689 701 ntBASIC19.75■□□□□ 0.75
SLF1Q9BQI6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 AC027612.4-201ENST00000605371 583 ntBASIC19.75■□□□□ 0.75
SLF1Q9BQI6 REXO1L3P-201ENST00000622202 1288 ntBASIC19.75■□□□□ 0.75
SLF1Q9BQI6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLF1Q9BQI6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 AL513210.1-201ENST00000629608 234 ntBASIC19.74■□□□□ 0.75
SLF1Q9BQI6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLF1Q9BQI6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 AL645728.2-201ENST00000641974 660 ntBASIC19.73■□□□□ 0.75
SLF1Q9BQI6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLF1Q9BQI6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 AC002056.1-201ENST00000395613 760 ntBASIC19.72■□□□□ 0.75
SLF1Q9BQI6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 AC105339.1-204ENST00000636249 355 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms