Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL13Q99616 AC060834.1-201ENST00000443027 2032 ntBASIC14.27□□□□□ -0.12
CCL13Q99616 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCL13Q99616 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL13Q99616 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 IL9RP2-201ENST00000423948 1312 ntBASIC14.27□□□□□ -0.12
CCL13Q99616 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL13Q99616 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCL13Q99616 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL13Q99616 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL13Q99616 RNA5SP415-201ENST00000517246 115 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL13Q99616 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL13Q99616 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL13Q99616 TERC-201ENST00000602385 541 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 AC008667.4-201ENST00000607370 168 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL13Q99616 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL13Q99616 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL13Q99616 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL13Q99616 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL13Q99616 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL13Q99616 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL13Q99616 AC092068.3-201ENST00000587894 2016 ntBASIC14.27□□□□□ -0.13
CCL13Q99616 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL13Q99616 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL13Q99616 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL13Q99616 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 IGHV3-65-201ENST00000523210 341 ntBASIC14.26□□□□□ -0.13
CCL13Q99616 UNC93B6-202ENST00000528242 690 ntBASIC14.26□□□□□ -0.13
CCL13Q99616 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 AC120114.3-201ENST00000611923 658 ntBASIC14.26□□□□□ -0.13
CCL13Q99616 GGTLC5P-201ENST00000617623 998 ntBASIC14.26□□□□□ -0.13
CCL13Q99616 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCL13Q99616 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CCL13Q99616 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCL13Q99616 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL13Q99616 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CCL13Q99616 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL13Q99616 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL13Q99616 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 PAWRP1-201ENST00000451083 565 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 AC108073.2-201ENST00000464002 357 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 AC108751.1-201ENST00000490852 363 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms