Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 AC104581.4-201ENST00000623126 3052 ntBASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 AL391256.1-201ENST00000443260 1855 ntBASIC16.06■□□□□ 0.16
NR1H4Q96RI1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 HOXB1-202ENST00000577092 1414 ntBASIC16.06■□□□□ 0.16
NR1H4Q96RI1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 KRT16P5-201ENST00000455284 522 ntBASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.06■□□□□ 0.16
NR1H4Q96RI1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H4Q96RI1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 GRK6P1-201ENST00000400595 1711 ntBASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SNX18-202ENST00000343017 3140 ntBASIC16.05■□□□□ 0.16
NR1H4Q96RI1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms