Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CNN2P3-201ENST00000450201 906 ntBASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 AC069335.1-201ENST00000489972 472 ntBASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 AL136317.3-201ENST00000618497 906 ntBASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 AL161645.1-201ENST00000622716 1255 ntBASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNGAP1Q96PV0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGAP1Q96PV0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGAP1Q96PV0 HTR7P1-202ENST00000624664 4411 ntBASIC19.27■□□□□ 0.67
SYNGAP1Q96PV0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.27■□□□□ 0.67
SYNGAP1Q96PV0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGAP1Q96PV0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 KRT18P32-201ENST00000424695 1287 ntBASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 AL390955.2-201ENST00000603032 514 ntBASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 AP001059.3-201ENST00000619053 235 ntBASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNGAP1Q96PV0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 HMGA1P7-201ENST00000406908 502 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 AC051619.7-201ENST00000568314 623 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms