Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 GGTLC5P-201ENST00000617623 998 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 AC002310.6-201ENST00000624451 1377 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 ELK2BP-201ENST00000415014 1224 ntBASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 AC073648.2-201ENST00000510116 352 ntBASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 OR7E14P-202ENST00000530490 1290 ntBASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 MIR4492-201ENST00000581627 80 ntBASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 AL121912.1-201ENST00000603683 238 ntBASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM5Q96HC4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM5Q96HC4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM5Q96HC4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM5Q96HC4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM5Q96HC4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.58■□□□□ 0.25
PDLIM5Q96HC4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.58■□□□□ 0.25
PDLIM5Q96HC4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 RPS2P1-201ENST00000434010 821 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC018712.1-201ENST00000455767 687 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms