Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 AC132938.2-201ENST00000579188 680 ntBASIC16.81■□□□□ 0.28
CLDN23Q96B33 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 AL133215.2-201ENST00000609242 977 ntBASIC16.81■□□□□ 0.28
CLDN23Q96B33 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 SPTSSB-204ENST00000617024 1292 ntBASIC16.81■□□□□ 0.28
CLDN23Q96B33 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 AL591163.1-201ENST00000641757 987 ntBASIC16.81■□□□□ 0.28
CLDN23Q96B33 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 KRT8P49-201ENST00000604166 1432 ntBASIC16.8■□□□□ 0.28
CLDN23Q96B33 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 BANF1P1-201ENST00000553684 263 ntBASIC16.8■□□□□ 0.28
CLDN23Q96B33 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 AC090164.3-201ENST00000610780 2143 ntBASIC16.8■□□□□ 0.28
CLDN23Q96B33 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.8■□□□□ 0.28
CLDN23Q96B33 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CLDN23Q96B33 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN23Q96B33 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC138932.1-201ENST00000534164 6830 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AL080243.2-201ENST00000418783 582 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC093004.1-201ENST00000508850 424 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AL079307.3-201ENST00000556114 283 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 AC105021.1-202ENST00000570572 669 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 AP000974.1-201ENST00000623909 2387 ntBASIC16.79■□□□□ 0.28
CLDN23Q96B33 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN23Q96B33 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN23Q96B33 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms