Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 LINC00896-202ENST00000609602 2128 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RPL37AP1-201ENST00000412502 279 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 PRYP6-201ENST00000514804 343 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 AC010336.2-201ENST00000564226 506 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 MIR6799-201ENST00000620297 69 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 AC004840.1-201ENST00000636359 365 ntBASIC20.62■□□□□ 0.89
CNKSR1Q969H4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CNKSR1Q969H4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 MTND6P24-201ENST00000440466 518 ntBASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 RN7SL828P-201ENST00000607615 303 ntBASIC20.61■□□□□ 0.89
CNKSR1Q969H4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNKSR1Q969H4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 FAM220BP-201ENST00000377689 816 ntBASIC20.6■□□□□ 0.89
CNKSR1Q969H4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 DFFBP1-201ENST00000433250 979 ntBASIC20.6■□□□□ 0.89
CNKSR1Q969H4 AC017083.2-201ENST00000608069 979 ntBASIC20.6■□□□□ 0.89
CNKSR1Q969H4 IGHV3-72-202ENST00000621503 303 ntBASIC20.6■□□□□ 0.89
CNKSR1Q969H4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 KRT8P49-201ENST00000604166 1432 ntBASIC20.6■□□□□ 0.89
CNKSR1Q969H4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNKSR1Q969H4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms