Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6NLQ92738 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP6NLQ92738 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP6NLQ92738 AC100757.3-201ENST00000622361 1406 ntBASIC19.16■□□□□ 0.66
USP6NLQ92738 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP6NLQ92738 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6NLQ92738 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6NLQ92738 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.16■□□□□ 0.66
USP6NLQ92738 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
USP6NLQ92738 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP6NLQ92738 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP6NLQ92738 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6NLQ92738 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
USP6NLQ92738 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 PIN1P1-201ENST00000412108 996 ntBASIC19.15■□□□□ 0.66
USP6NLQ92738 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.15■□□□□ 0.66
USP6NLQ92738 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.15■□□□□ 0.66
USP6NLQ92738 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.15■□□□□ 0.66
USP6NLQ92738 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6NLQ92738 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.15■□□□□ 0.66
USP6NLQ92738 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP6NLQ92738 AL358472.5-202ENST00000641448 1267 ntBASIC19.15■□□□□ 0.66
USP6NLQ92738 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 TOP3BP1-201ENST00000420768 1380 ntBASIC19.15■□□□□ 0.66
USP6NLQ92738 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP6NLQ92738 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6NLQ92738 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.66
USP6NLQ92738 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP6NLQ92738 AC016027.1-202ENST00000607927 1699 ntBASIC19.14■□□□□ 0.66
USP6NLQ92738 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.14■□□□□ 0.65
USP6NLQ92738 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.14■□□□□ 0.65
USP6NLQ92738 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 AC142381.1-201ENST00000426099 345 ntBASIC19.14■□□□□ 0.65
USP6NLQ92738 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6NLQ92738 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6NLQ92738 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6NLQ92738 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP6NLQ92738 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6NLQ92738 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
USP6NLQ92738 AC073592.8-201ENST00000624126 511 ntBASIC19.14■□□□□ 0.65
USP6NLQ92738 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6NLQ92738 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6NLQ92738 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP6NLQ92738 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6NLQ92738 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6NLQ92738 AC027369.6-201ENST00000525520 931 ntBASIC19.13■□□□□ 0.65
USP6NLQ92738 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 AC027307.3-201ENST00000594262 1100 ntBASIC19.13■□□□□ 0.65
USP6NLQ92738 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 AC009118.2-201ENST00000613275 655 ntBASIC19.13■□□□□ 0.65
USP6NLQ92738 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6NLQ92738 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms