Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC073592.4-201ENST00000623827 446 ntBASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 LINC00982-205ENST00000420957 435 ntBASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 PRELID1P1-202ENST00000567272 903 ntBASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAF3IP1Q8TDR0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRAF3IP1Q8TDR0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 BX005266.1-201ENST00000473402 457 ntBASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 AC004817.3-201ENST00000602957 2129 ntBASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF3IP1Q8TDR0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 RBM17P3-201ENST00000417687 1192 ntBASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 AC106795.1-205ENST00000512851 1056 ntBASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms