Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIML2Q8N7C3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIML2Q8N7C3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 KRT18P57-201ENST00000443599 1254 ntBASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 KRT18P38-201ENST00000449496 1282 ntBASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 GUSBP12-201ENST00000513727 720 ntBASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 IGHV3-52-201ENST00000519770 353 ntBASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIML2Q8N7C3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 VENTXP5-201ENST00000523979 775 ntBASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 LINC01238-205ENST00000567549 1107 ntBASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 LINC01023-201ENST00000606054 436 ntBASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 AC116353.5-201ENST00000638148 1699 ntBASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIML2Q8N7C3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 AC007950.2-201ENST00000615045 2347 ntBASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIML2Q8N7C3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms