Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC254562.1-201ENST00000417586 456 ntBASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AL031432.2-201ENST00000566714 459 ntBASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AL928711.1-201ENST00000570165 459 ntBASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC027796.2-201ENST00000575326 344 ntBASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 AC025580.3-201ENST00000617932 1424 ntBASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
PHTF2Q8N3S3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 LINC01451-201ENST00000623792 534 ntBASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PHTF2Q8N3S3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 HMGN1P19-201ENST00000436976 333 ntBASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 CXCL1P1-201ENST00000502804 216 ntBASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PHTF2Q8N3S3 LINC00304-203ENST00000565008 1864 ntBASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHTF2Q8N3S3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms