Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PGBD3Q8N328 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD3Q8N328 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD3Q8N328 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD3Q8N328 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD3Q8N328 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD3Q8N328 PAWRP1-201ENST00000451083 565 ntBASIC17.27■□□□□ 0.36
PGBD3Q8N328 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD3Q8N328 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
PGBD3Q8N328 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD3Q8N328 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.27■□□□□ 0.35
PGBD3Q8N328 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD3Q8N328 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD3Q8N328 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.26■□□□□ 0.35
PGBD3Q8N328 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 AC129492.6-201ENST00000611383 1305 ntBASIC17.26■□□□□ 0.35
PGBD3Q8N328 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 AC002056.1-201ENST00000395613 760 ntBASIC17.26■□□□□ 0.35
PGBD3Q8N328 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 AC022145.2-201ENST00000598203 171 ntBASIC17.26■□□□□ 0.35
PGBD3Q8N328 ACTL9-202ENST00000612068 1252 ntBASIC17.26■□□□□ 0.35
PGBD3Q8N328 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms