Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 MIR4751-201ENST00000578027 74 ntBASIC17.87■□□□□ 0.45
ALYREFQ86V81 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 LINC00602-201ENST00000629776 2065 ntBASIC17.87■□□□□ 0.45
ALYREFQ86V81 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.87■□□□□ 0.45
ALYREFQ86V81 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALYREFQ86V81 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC073621.1-201ENST00000392730 636 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 RPS2P32-201ENST00000439199 892 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 RN7SL692P-201ENST00000464677 288 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC136632.2-201ENST00000512891 861 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC015911.4-201ENST00000588022 1070 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC006557.2-201ENST00000592985 1240 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 AC105339.1-204ENST00000636249 355 ntBASIC17.86■□□□□ 0.45
ALYREFQ86V81 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALYREFQ86V81 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.86■□□□□ 0.45
ALYREFQ86V81 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC003669.1-201ENST00000334569 611 ntBASIC17.85■□□□□ 0.45
ALYREFQ86V81 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 VN2R19P-201ENST00000442399 1052 ntBASIC17.85■□□□□ 0.45
ALYREFQ86V81 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALYREFQ86V81 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.85■□□□□ 0.45
ALYREFQ86V81 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALYREFQ86V81 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms