Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13BQ7Z7G8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13BQ7Z7G8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13BQ7Z7G8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13BQ7Z7G8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13BQ7Z7G8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AP006294.1-201ENST00000415407 339 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ZNF890P-202ENST00000530367 1156 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC027369.6-201ENST00000525520 931 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC132938.2-201ENST00000579188 680 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC017083.2-201ENST00000608069 979 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC008267.7-201ENST00000624570 1194 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AL591163.1-201ENST00000641757 987 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13BQ7Z7G8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC009118.2-201ENST00000613275 655 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC073592.8-201ENST00000624126 511 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms