Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 PAWRP1-201ENST00000451083 565 ntBASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 IGHV3-65-201ENST00000523210 341 ntBASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 AC092068.3-201ENST00000587894 2016 ntBASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD3Q7Z3D4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 AC108073.2-201ENST00000464002 357 ntBASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 RNA5SP415-201ENST00000517246 115 ntBASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 AC124947.2-201ENST00000547118 1133 ntBASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD3Q7Z3D4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 AC087163.2-201ENST00000457299 853 ntBASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 UNC93B6-202ENST00000528242 690 ntBASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 AF228730.7-201ENST00000641842 219 ntBASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms