Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
BRAT1Q6PJG6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAT1Q6PJG6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAT1Q6PJG6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 AL031432.2-201ENST00000566714 459 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 AL928711.1-201ENST00000570165 459 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 MIR3687-2-201ENST00000577708 61 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 MIR3687-1-201ENST00000614492 61 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17■□□□□ 0.31
BRAT1Q6PJG6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17■□□□□ 0.31
BRAT1Q6PJG6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
BRAT1Q6PJG6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 UPF3AP3-201ENST00000420996 769 ntBASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 MPDU1-223ENST00000582151 728 ntBASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 PKD1P1-201ENST00000458669 6805 ntBASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
BRAT1Q6PJG6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 AC012569.1-201ENST00000591191 1524 ntBASIC16.98■□□□□ 0.31
BRAT1Q6PJG6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms