Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 FAM201B-201ENST00000458407 597 ntBASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CD99P1-205ENST00000527459 561 ntBASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
KCNIP4Q6PIL6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC022532.1-201ENST00000624563 1728 ntBASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 KRASP1-201ENST00000407852 552 ntBASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AC092053.1-201ENST00000605787 1936 ntBASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KCNIP4Q6PIL6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms