Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 TUBB8P12-201ENST00000308911 1335 ntBASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 TUBB7P-202ENST00000428444 1305 ntBASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 TUBB8P7-204ENST00000567960 1332 ntBASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 AL079307.3-201ENST00000556114 283 ntBASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC25.36■■□□□ 1.65
CDC42BPAQ5VT25 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPAQ5VT25 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 SPTSSB-204ENST00000617024 1292 ntBASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC25.34■■□□□ 1.65
CDC42BPAQ5VT25 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 LINC02012-201ENST00000608206 1725 ntBASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 PGF-202ENST00000405431 666 ntTSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPAQ5VT25 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPAQ5VT25 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPAQ5VT25 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 RBM39-205ENST00000397370 612 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms