Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 AC125634.1-201ENST00000438758 1403 ntBASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 TSPY26P-202ENST00000565928 3884 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 LIN28AP1-201ENST00000429574 405 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 SLC25A3P1-201ENST00000443844 931 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 AL365203.3-201ENST00000609742 2057 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 Z83836.1-201ENST00000624605 1642 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 AC009336.1-201ENST00000608941 1553 ntBASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC00242Q5T6M2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 LINC00554-201ENST00000564841 3011 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 AL353593.2-201ENST00000602529 1483 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 HBZP1-201ENST00000354915 429 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 FAM220CP-201ENST00000395253 831 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 STK19B-204ENST00000512515 211 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 AC011558.1-201ENST00000623459 338 ntBASIC11.66□□□□□ -0.54
LINC00242Q5T6M2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms