Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 CSF2RBP1-201ENST00000447905 391 ntBASIC14.57□□□□□ -0.08
LRRK2Q5S007 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRK2Q5S007 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRK2Q5S007 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 MIR3615-201ENST00000581999 87 ntBASIC14.56□□□□□ -0.08
LRRK2Q5S007 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 AL033527.5-202ENST00000641632 1098 ntBASIC14.56□□□□□ -0.08
LRRK2Q5S007 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRK2Q5S007 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRRK2Q5S007 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 MIR4706-201ENST00000582134 82 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 HTR7P1-202ENST00000624664 4411 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms