Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.75■□□□□ 0.75
SSRP1Q08945 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
SSRP1Q08945 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
SSRP1Q08945 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSRP1Q08945 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.74■□□□□ 0.75
SSRP1Q08945 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.74■□□□□ 0.75
SSRP1Q08945 MRPL3P1-201ENST00000400109 1033 ntBASIC19.74■□□□□ 0.75
SSRP1Q08945 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.74■□□□□ 0.75
SSRP1Q08945 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 AL031284.1-201ENST00000419297 478 ntBASIC19.74■□□□□ 0.75
SSRP1Q08945 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.74■□□□□ 0.75
SSRP1Q08945 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
SSRP1Q08945 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.74■□□□□ 0.75
SSRP1Q08945 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SSRP1Q08945 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.74■□□□□ 0.75
SSRP1Q08945 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SSRP1Q08945 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SSRP1Q08945 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSRP1Q08945 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSRP1Q08945 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SSRP1Q08945 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.73■□□□□ 0.75
SSRP1Q08945 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.73■□□□□ 0.75
SSRP1Q08945 AC087163.2-201ENST00000457299 853 ntBASIC19.73■□□□□ 0.75
SSRP1Q08945 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSRP1Q08945 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 RNF216P1-203ENST00000404404 2427 ntBASIC19.73■□□□□ 0.75
SSRP1Q08945 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSRP1Q08945 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.72■□□□□ 0.75
SSRP1Q08945 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SSRP1Q08945 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSRP1Q08945 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.72■□□□□ 0.75
SSRP1Q08945 AGGF1P2-201ENST00000426656 2106 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.72■□□□□ 0.75
SSRP1Q08945 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SSRP1Q08945 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.72■□□□□ 0.75
SSRP1Q08945 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.72■□□□□ 0.75
SSRP1Q08945 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.72■□□□□ 0.75
SSRP1Q08945 AL049840.3-201ENST00000602669 611 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 KRT8P49-201ENST00000604166 1432 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.72■□□□□ 0.75
SSRP1Q08945 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 GGTLC5P-201ENST00000617623 998 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 AC005593.1-201ENST00000624894 515 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms