Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 LINC00982-205ENST00000420957 435 ntBASIC16.43■□□□□ 0.22
HMGCS1Q01581 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 HCG4P8-203ENST00000443049 980 ntBASIC16.43■□□□□ 0.22
HMGCS1Q01581 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AP001269.4-201ENST00000609611 512 ntBASIC16.43■□□□□ 0.22
HMGCS1Q01581 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AC073592.4-201ENST00000623827 446 ntBASIC16.43■□□□□ 0.22
HMGCS1Q01581 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 AL662844.4-201ENST00000606367 2838 ntBASIC16.42■□□□□ 0.22
HMGCS1Q01581 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 AC132008.2-207ENST00000454517 770 ntBASIC16.42■□□□□ 0.22
HMGCS1Q01581 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 AP005117.1-201ENST00000584346 1413 ntBASIC16.42■□□□□ 0.22
HMGCS1Q01581 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 PCDH8P1-201ENST00000428983 2773 ntBASIC16.42■□□□□ 0.22
HMGCS1Q01581 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCS1Q01581 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.41■□□□□ 0.22
HMGCS1Q01581 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 BX005266.1-201ENST00000473402 457 ntBASIC16.41■□□□□ 0.22
HMGCS1Q01581 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 FOSL1P1-201ENST00000511041 816 ntBASIC16.41■□□□□ 0.22
HMGCS1Q01581 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.41■□□□□ 0.22
HMGCS1Q01581 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms