Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 CNN2P2-201ENST00000443536 909 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 CNN2P3-201ENST00000450201 906 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.67■□□□□ 0.74
HERVK_113P62684 AC093214.1-201ENST00000511688 1107 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 RNA5SP421-201ENST00000516864 134 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.67■□□□□ 0.74
HERVK_113P62684 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.67■□□□□ 0.74
HERVK_113P62684 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.67■□□□□ 0.74
HERVK_113P62684 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 AL512356.2-201ENST00000546955 174 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HERVK_113P62684 DUX4L17-201ENST00000557360 1267 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 AC051619.7-201ENST00000568314 623 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.67■□□□□ 0.74
HERVK_113P62684 AL136317.3-201ENST00000618497 906 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 AJ011932.1-201ENST00000621707 465 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.67■□□□□ 0.74
HERVK_113P62684 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 AC099398.1-201ENST00000567919 2776 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HERVK_113P62684 AKAP8P1-201ENST00000434743 1349 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
HERVK_113P62684 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HERVK_113P62684 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
HERVK_113P62684 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 HMGA1P7-201ENST00000406908 502 ntBASIC19.66■□□□□ 0.74
HERVK_113P62684 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.66■□□□□ 0.74
HERVK_113P62684 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.66■□□□□ 0.74
HERVK_113P62684 AC069262.1-201ENST00000539058 672 ntBASIC19.66■□□□□ 0.74
HERVK_113P62684 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.66■□□□□ 0.74
HERVK_113P62684 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 AC239800.4-201ENST00000603712 296 ntBASIC19.66■□□□□ 0.74
HERVK_113P62684 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HERVK_113P62684 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 LINC00304-203ENST00000565008 1864 ntBASIC19.66■□□□□ 0.74
HERVK_113P62684 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HERVK_113P62684 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HERVK_113P62684 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.66■□□□□ 0.74
HERVK_113P62684 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.66■□□□□ 0.74
HERVK_113P62684 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERVK_113P62684 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 LYSMD4-203ENST00000378904 2122 ntBASIC19.65■□□□□ 0.74
HERVK_113P62684 GPS2P2-201ENST00000430745 888 ntBASIC19.65■□□□□ 0.74
HERVK_113P62684 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.65■□□□□ 0.74
HERVK_113P62684 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.65■□□□□ 0.74
HERVK_113P62684 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 AP001059.3-201ENST00000619053 235 ntBASIC19.65■□□□□ 0.74
HERVK_113P62684 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HERVK_113P62684 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HERVK_113P62684 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERVK_113P62684 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.64■□□□□ 0.74
HERVK_113P62684 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERVK_113P62684 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.64■□□□□ 0.74
HERVK_113P62684 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERVK_113P62684 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HERVK_113P62684 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERVK_113P62684 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
HERVK_113P62684 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERVK_113P62684 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.64■□□□□ 0.73
HERVK_113P62684 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.64■□□□□ 0.73
HERVK_113P62684 PMS2P4-201ENST00000412466 1052 ntBASIC19.64■□□□□ 0.73
HERVK_113P62684 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.64■□□□□ 0.73
HERVK_113P62684 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.64■□□□□ 0.73
HERVK_113P62684 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.64■□□□□ 0.73
HERVK_113P62684 SPCS2P4-201ENST00000436160 681 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms