Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL138688.1-201ENST00000624851 1594 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 AC046185.3-201ENST00000623228 1824 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN20P56880 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CLDN20P56880 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 AC107918.4-202ENST00000641623 219 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CLDN20P56880 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 CROCCP2-202ENST00000412962 2773 ntBASIC15.66■□□□□ 0.1
CLDN20P56880 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN20P56880 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN20P56880 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN20P56880 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN20P56880 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 AC012640.2-201ENST00000561606 901 ntBASIC15.65■□□□□ 0.1
CLDN20P56880 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN20P56880 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN20P56880 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN20P56880 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN20P56880 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 AC243591.1-201ENST00000452967 1364 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN20P56880 AC097637.2-201ENST00000624096 1997 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 RPS2P28-201ENST00000314255 741 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 LAGE3P1-201ENST00000425356 484 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms