Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC4P55056 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC4P55056 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
APOC4P55056 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.46□□□□□ -0.41
APOC4P55056 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.46□□□□□ -0.41
APOC4P55056 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.46□□□□□ -0.41
APOC4P55056 SLC25A6P2-201ENST00000497974 877 ntBASIC12.46□□□□□ -0.41
APOC4P55056 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC4P55056 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 AC112191.1-201ENST00000523689 701 ntBASIC12.46□□□□□ -0.41
APOC4P55056 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.46□□□□□ -0.41
APOC4P55056 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
APOC4P55056 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.46□□□□□ -0.41
APOC4P55056 AP001350.2-201ENST00000625104 1094 ntBASIC12.46□□□□□ -0.41
APOC4P55056 AC092865.6-201ENST00000642101 219 ntBASIC12.46□□□□□ -0.41
APOC4P55056 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC4P55056 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
APOC4P55056 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
APOC4P55056 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOC4P55056 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOC4P55056 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 HTR5BP-201ENST00000430851 1154 ntBASIC12.45□□□□□ -0.42
APOC4P55056 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 AL031432.2-201ENST00000566714 459 ntBASIC12.45□□□□□ -0.42
APOC4P55056 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC4P55056 AL928711.1-201ENST00000570165 459 ntBASIC12.45□□□□□ -0.42
APOC4P55056 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC4P55056 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC4P55056 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APOC4P55056 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 NOC2LP2-201ENST00000407594 1944 ntBASIC12.45□□□□□ -0.42
APOC4P55056 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC4P55056 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC4P55056 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms