Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC25A1P53007 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC25A1P53007 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 AC099336.1-202ENST00000602961 463 ntBASIC15.13■□□□□ 0.01
SLC25A1P53007 AC013467.2-201ENST00000605472 835 ntBASIC15.13■□□□□ 0.01
SLC25A1P53007 AL353135.1-201ENST00000606729 504 ntBASIC15.13■□□□□ 0.01
SLC25A1P53007 NPAP1P7-201ENST00000613027 823 ntBASIC15.13■□□□□ 0.01
SLC25A1P53007 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 AL590787.1-201ENST00000568856 1315 ntBASIC15.13■□□□□ 0.01
SLC25A1P53007 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
SLC25A1P53007 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC25A1P53007 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC25A1P53007 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC25A1P53007 AL391005.1-201ENST00000623953 2435 ntBASIC15.12■□□□□ 0.01
SLC25A1P53007 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC25A1P53007 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC25A1P53007 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 AC243591.1-201ENST00000452967 1364 ntBASIC15.11■□□□□ 0.01
SLC25A1P53007 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 AL513523.2-202ENST00000427283 2040 ntBASIC15.11■□□□□ 0.01
SLC25A1P53007 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
SLC25A1P53007 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 AL591684.3-201ENST00000605187 298 ntBASIC15.11■□□□□ 0.01
SLC25A1P53007 AC069148.1-201ENST00000608741 768 ntBASIC15.11■□□□□ 0.01
SLC25A1P53007 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC25A1P53007 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms