Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NUP98P52948 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUP98P52948 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 MPDU1-223ENST00000582151 728 ntBASIC20.92■□□□□ 0.94
NUP98P52948 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 AC012645.4-201ENST00000610691 1061 ntBASIC20.92■□□□□ 0.94
NUP98P52948 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.92■□□□□ 0.94
NUP98P52948 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
NUP98P52948 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 HLA-H-201ENST00000383620 1096 ntBASIC20.92■□□□□ 0.94
NUP98P52948 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NUP98P52948 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.92■□□□□ 0.94
NUP98P52948 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.92■□□□□ 0.94
NUP98P52948 INGX-202ENST00000489074 768 ntBASIC20.92■□□□□ 0.94
NUP98P52948 AC004790.1-201ENST00000612686 536 ntBASIC20.92■□□□□ 0.94
NUP98P52948 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.92■□□□□ 0.94
NUP98P52948 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP98P52948 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NUP98P52948 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.91■□□□□ 0.94
NUP98P52948 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.91■□□□□ 0.94
NUP98P52948 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.91■□□□□ 0.94
NUP98P52948 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NUP98P52948 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.91■□□□□ 0.94
NUP98P52948 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NUP98P52948 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
NUP98P52948 RNA5SP410-201ENST00000516285 106 ntBASIC20.91■□□□□ 0.94
NUP98P52948 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.91■□□□□ 0.94
NUP98P52948 AC003101.2-201ENST00000612557 442 ntBASIC20.91■□□□□ 0.94
NUP98P52948 AC025048.6-201ENST00000634326 1161 ntBASIC20.91■□□□□ 0.94
NUP98P52948 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 AC067852.2-201ENST00000590513 2313 ntBASIC20.91■□□□□ 0.94
NUP98P52948 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUP98P52948 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.9■□□□□ 0.94
NUP98P52948 AC009477.1-201ENST00000452936 217 ntBASIC20.9■□□□□ 0.94
NUP98P52948 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 TERF1P3-201ENST00000505638 1227 ntBASIC20.9■□□□□ 0.94
NUP98P52948 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 AL844908.2-201ENST00000609461 460 ntBASIC20.9■□□□□ 0.94
NUP98P52948 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
NUP98P52948 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 AC092068.3-201ENST00000587894 2016 ntBASIC20.9■□□□□ 0.94
NUP98P52948 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 AP005018.1-201ENST00000525475 301 ntBASIC20.9■□□□□ 0.94
NUP98P52948 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.9■□□□□ 0.94
NUP98P52948 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUP98P52948 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP98P52948 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NUP98P52948 PKD1P6-201ENST00000343738 4769 ntBASIC20.89■□□□□ 0.94
NUP98P52948 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.89■□□□□ 0.94
NUP98P52948 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms