Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1A1P48729 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1A1P48729 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1A1P48729 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1A1P48729 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1A1P48729 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1A1P48729 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1A1P48729 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1A1P48729 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 AC092068.3-201ENST00000587894 2016 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 FAAHP1-202ENST00000446499 1238 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 FAM197Y8-203ENST00000450145 560 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 AF186996.4-201ENST00000467186 377 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 OR7E14P-202ENST00000530490 1290 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 TP73-AS1-207ENST00000624167 988 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 AC107918.4-202ENST00000641623 219 ntBASIC15.17■□□□□ 0.02
CSNK1A1P48729 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1A1P48729 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1A1P48729 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 AC243591.1-201ENST00000452967 1364 ntBASIC15.16■□□□□ 0.02
CSNK1A1P48729 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 RPS2P1-201ENST00000434010 821 ntBASIC15.16■□□□□ 0.02
CSNK1A1P48729 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 RNPS1P1-201ENST00000507437 918 ntBASIC15.16■□□□□ 0.02
CSNK1A1P48729 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1A1P48729 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.16■□□□□ 0.02
CSNK1A1P48729 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1A1P48729 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms