Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.39■■□□□ 1.02
COL15A1P39059 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.39■■□□□ 1.02
COL15A1P39059 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.39■■□□□ 1.02
COL15A1P39059 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
COL15A1P39059 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
COL15A1P39059 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
COL15A1P39059 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.39■■□□□ 1.01
COL15A1P39059 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.39■■□□□ 1.01
COL15A1P39059 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.39■■□□□ 1.01
COL15A1P39059 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.39■■□□□ 1.01
COL15A1P39059 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL15A1P39059 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
COL15A1P39059 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
COL15A1P39059 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
COL15A1P39059 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.38■■□□□ 1.01
COL15A1P39059 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 AP005018.1-201ENST00000525475 301 ntBASIC21.38■■□□□ 1.01
COL15A1P39059 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.38■■□□□ 1.01
COL15A1P39059 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 MIR4453-201ENST00000584019 89 ntBASIC21.38■■□□□ 1.01
COL15A1P39059 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.38■■□□□ 1.01
COL15A1P39059 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
COL15A1P39059 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL15A1P39059 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL15A1P39059 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COL15A1P39059 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.38■■□□□ 1.01
COL15A1P39059 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.37■■□□□ 1.01
COL15A1P39059 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL15A1P39059 AC142381.1-201ENST00000426099 345 ntBASIC21.37■■□□□ 1.01
COL15A1P39059 AL512638.1-201ENST00000457493 794 ntBASIC21.37■■□□□ 1.01
COL15A1P39059 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.37■■□□□ 1.01
COL15A1P39059 SERBP1P5-201ENST00000510079 1181 ntBASIC21.37■■□□□ 1.01
COL15A1P39059 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.37■■□□□ 1.01
COL15A1P39059 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.37■■□□□ 1.01
COL15A1P39059 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.37■■□□□ 1.01
COL15A1P39059 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.37■■□□□ 1.01
COL15A1P39059 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
COL15A1P39059 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL15A1P39059 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL15A1P39059 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 AC241585.1-201ENST00000433527 519 ntBASIC21.36■■□□□ 1.01
COL15A1P39059 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL15A1P39059 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.36■■□□□ 1.01
COL15A1P39059 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.36■■□□□ 1.01
COL15A1P39059 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.36■■□□□ 1.01
COL15A1P39059 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
COL15A1P39059 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL15A1P39059 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL15A1P39059 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL15A1P39059 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.36■■□□□ 1.01
COL15A1P39059 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL15A1P39059 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms