Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.66■□□□□ 0.42
SCNN1AP37088 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.66■□□□□ 0.42
SCNN1AP37088 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.66■□□□□ 0.42
SCNN1AP37088 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
SCNN1AP37088 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.66■□□□□ 0.42
SCNN1AP37088 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.66■□□□□ 0.42
SCNN1AP37088 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 AC106820.2-201ENST00000563775 3264 ntBASIC17.66■□□□□ 0.42
SCNN1AP37088 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 AC104109.2-201ENST00000602919 1418 ntBASIC17.65■□□□□ 0.42
SCNN1AP37088 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.65■□□□□ 0.42
SCNN1AP37088 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
SCNN1AP37088 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.65■□□□□ 0.42
SCNN1AP37088 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 RHOQP3-201ENST00000437982 621 ntBASIC17.65■□□□□ 0.42
SCNN1AP37088 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 RPL13AP23-201ENST00000480739 586 ntBASIC17.65■□□□□ 0.42
SCNN1AP37088 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.65■□□□□ 0.42
SCNN1AP37088 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.65■□□□□ 0.42
SCNN1AP37088 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCNN1AP37088 AC096734.2-201ENST00000562054 433 ntBASIC17.65■□□□□ 0.42
SCNN1AP37088 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.65■□□□□ 0.42
SCNN1AP37088 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.65■□□□□ 0.42
SCNN1AP37088 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.65■□□□□ 0.42
SCNN1AP37088 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.65■□□□□ 0.42
SCNN1AP37088 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.65■□□□□ 0.42
SCNN1AP37088 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.65■□□□□ 0.42
SCNN1AP37088 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCNN1AP37088 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCNN1AP37088 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCNN1AP37088 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCNN1AP37088 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCNN1AP37088 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 NKILA-202ENST00000614771 2598 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
SCNN1AP37088 SNX33P1-201ENST00000592116 1762 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.64■□□□□ 0.41
SCNN1AP37088 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.64■□□□□ 0.41
SCNN1AP37088 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.64■□□□□ 0.41
SCNN1AP37088 MIR4515-201ENST00000584082 81 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 CYP2A7P1-201ENST00000595391 815 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 AL645728.2-201ENST00000641974 660 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 AC006538.1-201ENST00000567905 1585 ntBASIC17.64■□□□□ 0.41
SCNN1AP37088 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.64■□□□□ 0.41
SCNN1AP37088 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCNN1AP37088 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.64■□□□□ 0.41
SCNN1AP37088 PCDHA12-202ENST00000613593 2588 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms