Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPB2P35606 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COPB2P35606 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.39■□□□□ 0.7
COPB2P35606 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPB2P35606 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPB2P35606 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COPB2P35606 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
COPB2P35606 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COPB2P35606 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 AC092474.2-201ENST00000424288 719 ntBASIC19.39■□□□□ 0.69
COPB2P35606 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 RNA5SP421-201ENST00000516864 134 ntBASIC19.39■□□□□ 0.69
COPB2P35606 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.39■□□□□ 0.69
COPB2P35606 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 Z92544.3-201ENST00000624747 417 ntBASIC19.39■□□□□ 0.69
COPB2P35606 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COPB2P35606 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.39■□□□□ 0.69
COPB2P35606 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.39■□□□□ 0.69
COPB2P35606 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 AL355312.1-201ENST00000407115 2176 ntBASIC19.39■□□□□ 0.69
COPB2P35606 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPB2P35606 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPB2P35606 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.38■□□□□ 0.69
COPB2P35606 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPB2P35606 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COPB2P35606 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.38■□□□□ 0.69
COPB2P35606 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 SPCS2P4-201ENST00000436160 681 ntBASIC19.38■□□□□ 0.69
COPB2P35606 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPB2P35606 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPB2P35606 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.38■□□□□ 0.69
COPB2P35606 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPB2P35606 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COPB2P35606 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 AC084121.4-201ENST00000641598 221 ntBASIC19.38■□□□□ 0.69
COPB2P35606 AF228730.8-201ENST00000642140 221 ntBASIC19.38■□□□□ 0.69
COPB2P35606 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPB2P35606 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
COPB2P35606 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 WASH6P-202ENST00000359512 1437 ntBASIC19.37■□□□□ 0.69
COPB2P35606 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 PMS2P4-201ENST00000412466 1052 ntBASIC19.37■□□□□ 0.69
COPB2P35606 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.37■□□□□ 0.69
COPB2P35606 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COPB2P35606 AC069262.1-201ENST00000539058 672 ntBASIC19.37■□□□□ 0.69
COPB2P35606 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.37■□□□□ 0.69
COPB2P35606 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPB2P35606 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COPB2P35606 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms