Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.96■□□□□ 0.46
RFC1P35251 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.96■□□□□ 0.46
RFC1P35251 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.96■□□□□ 0.46
RFC1P35251 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFC1P35251 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 AP002414.1-201ENST00000391405 1147 ntBASIC17.95■□□□□ 0.46
RFC1P35251 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.95■□□□□ 0.46
RFC1P35251 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.95■□□□□ 0.46
RFC1P35251 AC004706.3-202ENST00000621574 984 ntBASIC17.95■□□□□ 0.46
RFC1P35251 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 FLJ38576-201ENST00000623820 2459 ntBASIC17.95■□□□□ 0.46
RFC1P35251 AC084018.2-201ENST00000613093 2607 ntBASIC17.95■□□□□ 0.46
RFC1P35251 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC1P35251 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.95■□□□□ 0.46
RFC1P35251 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC1P35251 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 PCDHB17P-201ENST00000539533 2393 ntBASIC17.94■□□□□ 0.46
RFC1P35251 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
RFC1P35251 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.94■□□□□ 0.46
RFC1P35251 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.94■□□□□ 0.46
RFC1P35251 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.94■□□□□ 0.46
RFC1P35251 DUX4L17-201ENST00000557360 1267 ntBASIC17.94■□□□□ 0.46
RFC1P35251 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.94■□□□□ 0.46
RFC1P35251 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.94■□□□□ 0.46
RFC1P35251 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 AL691432.3-201ENST00000621860 400 ntBASIC17.94■□□□□ 0.46
RFC1P35251 TP73-AS1-207ENST00000624167 988 ntBASIC17.94■□□□□ 0.46
RFC1P35251 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
RFC1P35251 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC1P35251 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC1P35251 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC1P35251 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 OR6D1P-203ENST00000641209 4860 ntBASIC17.93■□□□□ 0.46
RFC1P35251 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms