Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 AC010336.2-201ENST00000564226 506 ntBASIC16.63■□□□□ 0.25
HOXA6P31267 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXA6P31267 IGHV3-72-202ENST00000621503 303 ntBASIC16.63■□□□□ 0.25
HOXA6P31267 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXA6P31267 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXA6P31267 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 BX323043.1-201ENST00000641006 1765 ntBASIC16.63■□□□□ 0.25
HOXA6P31267 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXA6P31267 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA6P31267 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HOXA6P31267 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA6P31267 DGCR5-201ENST00000399539 862 ntBASIC16.62■□□□□ 0.25
HOXA6P31267 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 INE1-201ENST00000456273 945 ntBASIC16.62■□□□□ 0.25
HOXA6P31267 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA6P31267 AC135586.1-201ENST00000539323 574 ntBASIC16.62■□□□□ 0.25
HOXA6P31267 HILS1-202ENST00000545329 423 ntBASIC16.62■□□□□ 0.25
HOXA6P31267 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA6P31267 AL133215.2-201ENST00000609242 977 ntBASIC16.62■□□□□ 0.25
HOXA6P31267 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA6P31267 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA6P31267 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA6P31267 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXA6P31267 AC079776.1-201ENST00000401540 1152 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 RPS2P32-201ENST00000439199 892 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXA6P31267 RN7SL752P-201ENST00000463779 287 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 AL079307.3-201ENST00000556114 283 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXA6P31267 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 AC105021.1-202ENST00000570572 669 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
HOXA6P31267 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HOXA6P31267 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA6P31267 AC016396.2-201ENST00000562575 1417 ntBASIC16.61■□□□□ 0.25
HOXA6P31267 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA6P31267 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA6P31267 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HOXA6P31267 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA6P31267 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms