Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 AL662844.1-201ENST00000546340 181 ntBASIC15.97■□□□□ 0.15
CHMP24386 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.97■□□□□ 0.15
CHMP24386 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 AC092053.1-201ENST00000605787 1936 ntBASIC15.97■□□□□ 0.15
CHMP24386 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP24386 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP24386 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP24386 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP24386 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP24386 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 KRT8P10-201ENST00000450021 1447 ntBASIC15.96■□□□□ 0.15
CHMP24386 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.96■□□□□ 0.15
CHMP24386 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 AP005117.1-201ENST00000584346 1413 ntBASIC15.96■□□□□ 0.15
CHMP24386 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHMP24386 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CHMP24386 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP24386 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 SLC25A1P3-201ENST00000395415 828 ntBASIC15.96■□□□□ 0.15
CHMP24386 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.96■□□□□ 0.15
CHMP24386 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 AF238378.1-201ENST00000526806 358 ntBASIC15.96■□□□□ 0.15
CHMP24386 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP24386 AC064862.7-201ENST00000604520 867 ntBASIC15.96■□□□□ 0.15
CHMP24386 AL355877.3-201ENST00000622820 899 ntBASIC15.96■□□□□ 0.15
CHMP24386 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHMP24386 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CHMP24386 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP24386 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP24386 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP24386 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHMP24386 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CHMP24386 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP24386 RNF216P1-203ENST00000404404 2427 ntBASIC15.95■□□□□ 0.14
CHMP24386 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CHMP24386 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CHMP24386 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP24386 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP24386 AC093525.9-201ENST00000624961 1746 ntBASIC15.95■□□□□ 0.14
CHMP24386 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms