Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP2B4P23634 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2B4P23634 KRT18P34-201ENST00000488218 1270 ntBASIC20.48■□□□□ 0.87
ATP2B4P23634 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 AC105233.2-201ENST00000523697 349 ntBASIC20.48■□□□□ 0.87
ATP2B4P23634 AF228730.5-201ENST00000530288 346 ntBASIC20.48■□□□□ 0.87
ATP2B4P23634 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2B4P23634 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2B4P23634 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.48■□□□□ 0.87
ATP2B4P23634 AC073389.1-201ENST00000595595 795 ntBASIC20.48■□□□□ 0.87
ATP2B4P23634 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2B4P23634 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2B4P23634 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP2B4P23634 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2B4P23634 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2B4P23634 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATP2B4P23634 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2B4P23634 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2B4P23634 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2B4P23634 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.47■□□□□ 0.87
ATP2B4P23634 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.47■□□□□ 0.87
ATP2B4P23634 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2B4P23634 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 LINC02560-201ENST00000596379 459 ntBASIC20.47■□□□□ 0.87
ATP2B4P23634 AC008761.3-201ENST00000624803 892 ntBASIC20.47■□□□□ 0.87
ATP2B4P23634 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2B4P23634 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
ATP2B4P23634 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2B4P23634 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 NOC2LP1-202ENST00000452600 2235 ntBASIC20.46■□□□□ 0.87
ATP2B4P23634 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
ATP2B4P23634 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.46■□□□□ 0.87
ATP2B4P23634 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2B4P23634 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2B4P23634 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.46■□□□□ 0.87
ATP2B4P23634 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.46■□□□□ 0.87
ATP2B4P23634 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.46■□□□□ 0.87
ATP2B4P23634 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2B4P23634 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.46■□□□□ 0.87
ATP2B4P23634 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATP2B4P23634 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ATP2B4P23634 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 AP3S2-216ENST00000617003 1561 ntBASIC20.46■□□□□ 0.87
ATP2B4P23634 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2B4P23634 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
ATP2B4P23634 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.45■□□□□ 0.87
ATP2B4P23634 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2B4P23634 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2B4P23634 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
ATP2B4P23634 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2B4P23634 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ATP2B4P23634 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2B4P23634 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.45■□□□□ 0.86
ATP2B4P23634 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2B4P23634 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.45■□□□□ 0.86
ATP2B4P23634 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2B4P23634 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.45■□□□□ 0.86
ATP2B4P23634 RARRES2P9-201ENST00000565168 469 ntBASIC20.45■□□□□ 0.86
ATP2B4P23634 AC018529.1-201ENST00000613063 361 ntBASIC20.45■□□□□ 0.86
ATP2B4P23634 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2B4P23634 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms