Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.9■□□□□ 0.14
NR4A1P22736 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
NR4A1P22736 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.9■□□□□ 0.14
NR4A1P22736 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 CYP2T1P-202ENST00000641596 2535 ntBASIC15.9■□□□□ 0.14
NR4A1P22736 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 AC022188.1-201ENST00000620960 1664 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 AC132938.6-201ENST00000623828 1655 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 AL513523.2-202ENST00000427283 2040 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 AL391807.1-203ENST00000604392 2365 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
NR4A1P22736 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 HLA-F-220ENST00000434407 884 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 PVRIG2P-201ENST00000435460 978 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 FAM86EP-206ENST00000510506 987 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.89■□□□□ 0.13
NR4A1P22736 AL136038.3-201ENST00000561909 1096 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.89■□□□□ 0.13
NR4A1P22736 AL136038.4-201ENST00000603606 1261 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 AC083849.1-201ENST00000615227 514 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 AC079602.3-201ENST00000623931 403 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NR4A1P22736 LYSMD4-203ENST00000378904 2122 ntBASIC15.89■□□□□ 0.13
NR4A1P22736 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NR4A1P22736 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR4A1P22736 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NR4A1P22736 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NR4A1P22736 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.88■□□□□ 0.13
NR4A1P22736 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NR4A1P22736 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.88■□□□□ 0.13
NR4A1P22736 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
NR4A1P22736 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.88■□□□□ 0.13
NR4A1P22736 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NR4A1P22736 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NR4A1P22736 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR4A1P22736 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms