Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 AC097637.2-201ENST00000624096 1997 ntBASIC16.75■□□□□ 0.27
CDH3P22223 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH3P22223 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH3P22223 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH3P22223 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH3P22223 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDH3P22223 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH3P22223 ZNF259P1-201ENST00000407656 1365 ntBASIC16.75■□□□□ 0.27
CDH3P22223 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH3P22223 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH3P22223 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH3P22223 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH3P22223 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH3P22223 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH3P22223 AL356488.2-201ENST00000602755 427 ntBASIC16.74■□□□□ 0.27
CDH3P22223 AC005593.1-201ENST00000624894 515 ntBASIC16.74■□□□□ 0.27
CDH3P22223 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDH3P22223 OR6D1P-203ENST00000641209 4860 ntBASIC16.74■□□□□ 0.27
CDH3P22223 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH3P22223 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 FLJ38576-201ENST00000623820 2459 ntBASIC16.74■□□□□ 0.27
CDH3P22223 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH3P22223 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH3P22223 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms