Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 PTCHD3P3-201ENST00000403073 906 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 AL450487.1-201ENST00000426799 995 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 AC079781.3-201ENST00000449110 356 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 FAM197Y8-203ENST00000450145 560 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 RNPS1P1-201ENST00000507437 918 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 OR7E14P-202ENST00000530490 1290 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.32■□□□□ 0.36
NFKB1P19838 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.32■□□□□ 0.36
NFKB1P19838 RN7SL510P-201ENST00000581311 263 ntBASIC17.32■□□□□ 0.36
NFKB1P19838 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NFKB1P19838 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
NFKB1P19838 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
NFKB1P19838 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
NFKB1P19838 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NFKB1P19838 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NFKB1P19838 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.31■□□□□ 0.36
NFKB1P19838 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
NFKB1P19838 AC006557.2-201ENST00000592985 1240 ntBASIC17.31■□□□□ 0.36
NFKB1P19838 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.31■□□□□ 0.36
NFKB1P19838 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NFKB1P19838 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
NFKB1P19838 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NFKB1P19838 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
NFKB1P19838 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.31■□□□□ 0.36
NFKB1P19838 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFKB1P19838 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.3■□□□□ 0.36
NFKB1P19838 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.3■□□□□ 0.36
NFKB1P19838 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NFKB1P19838 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.3■□□□□ 0.36
NFKB1P19838 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.3■□□□□ 0.36
NFKB1P19838 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.3■□□□□ 0.36
NFKB1P19838 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NFKB1P19838 AL031008.1-201ENST00000619963 541 ntBASIC17.3■□□□□ 0.36
NFKB1P19838 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms