Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA4P12838 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 BX276092.5-203ENST00000456199 560 ntBASIC13.91□□□□□ -0.18
DEFA4P12838 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.91□□□□□ -0.18
DEFA4P12838 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA4P12838 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.91□□□□□ -0.18
DEFA4P12838 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DEFA4P12838 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DEFA4P12838 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA4P12838 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.91□□□□□ -0.18
DEFA4P12838 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 SPDYE13P-201ENST00000445314 798 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 IGHV3-52-201ENST00000519770 353 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 KRT8P26-201ENST00000534154 1276 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 AL136038.3-201ENST00000561909 1096 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 AC087388.1-201ENST00000571370 1112 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA4P12838 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
DEFA4P12838 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 RNF216P1-203ENST00000404404 2427 ntBASIC13.9□□□□□ -0.18
DEFA4P12838 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
DEFA4P12838 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA4P12838 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.19
DEFA4P12838 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
DEFA4P12838 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DEFA4P12838 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DEFA4P12838 AC097374.2-201ENST00000618617 1306 ntBASIC13.9□□□□□ -0.19
DEFA4P12838 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms