Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 AC092919.2-201ENST00000623631 1645 ntBASIC13.32□□□□□ -0.28
CD28P10747 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.32□□□□□ -0.28
CD28P10747 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.32□□□□□ -0.28
CD28P10747 ACTG1P14-201ENST00000446382 1122 ntBASIC13.32□□□□□ -0.28
CD28P10747 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.32□□□□□ -0.28
CD28P10747 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 AC092902.6-201ENST00000641783 218 ntBASIC13.32□□□□□ -0.28
CD28P10747 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.32□□□□□ -0.28
CD28P10747 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 AC006116.8-202ENST00000587620 1550 ntBASIC13.32□□□□□ -0.28
CD28P10747 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CD28P10747 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
CD28P10747 LINC00304-203ENST00000565008 1864 ntBASIC13.31□□□□□ -0.28
CD28P10747 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
CD28P10747 LYSMD4-203ENST00000378904 2122 ntBASIC13.31□□□□□ -0.28
CD28P10747 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.31□□□□□ -0.28
CD28P10747 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.31□□□□□ -0.28
CD28P10747 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.31□□□□□ -0.28
CD28P10747 RFPL4AP1-201ENST00000530883 850 ntBASIC13.31□□□□□ -0.28
CD28P10747 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 AC027612.4-201ENST00000605371 583 ntBASIC13.31□□□□□ -0.28
CD28P10747 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.31□□□□□ -0.28
CD28P10747 AC106028.4-201ENST00000614509 607 ntBASIC13.31□□□□□ -0.28
CD28P10747 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CD28P10747 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CD28P10747 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CD28P10747 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD28P10747 AC068880.1-201ENST00000507289 2297 ntBASIC13.3□□□□□ -0.28
CD28P10747 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CD28P10747 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.3□□□□□ -0.28
CD28P10747 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CD28P10747 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CD28P10747 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms