Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 RN7SL692P-201ENST00000464677 288 ntBASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 AL596325.1-201ENST00000563991 1082 ntBASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 SPDYE22P-201ENST00000582158 798 ntBASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSB-PGBD3P0DP91 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CSB-PGBD3P0DP91 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CSB-PGBD3P0DP91 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC22.39■■□□□ 1.18
CSB-PGBD3P0DP91 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSB-PGBD3P0DP91 OR8S1-201ENST00000310194 1080 ntBASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 MEIS3P1-201ENST00000495167 958 ntBASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 CR383656.12-201ENST00000549567 513 ntBASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 SPDYE12P-201ENST00000618416 771 ntBASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 AC087289.5-201ENST00000586076 3175 ntBASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSB-PGBD3P0DP91 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 TSSK5P-201ENST00000423978 907 ntBASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 NME2P1-201ENST00000426182 414 ntBASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 RARRES2P9-201ENST00000565168 469 ntBASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 AC022144.1-201ENST00000602255 1580 ntBASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSB-PGBD3P0DP91 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 AC131009.4-201ENST00000624048 1740 ntBASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 EGFEM1P-202ENST00000431685 1563 ntBASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 AP3S2-216ENST00000617003 1561 ntBASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CSB-PGBD3P0DP91 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms