Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 AC068880.1-201ENST00000507289 2297 ntBASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 CROCCP2-202ENST00000412962 2773 ntBASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
IGHV4-38-2P0DP08 FRMD8P1-201ENST00000440433 1524 ntBASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 HCG4-201ENST00000418983 998 ntBASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AC243562.1-201ENST00000560672 389 ntBASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AL161645.1-201ENST00000622716 1255 ntBASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-38-2P0DP08 NOC2LP2-201ENST00000407594 1944 ntBASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC025678.2-201ENST00000562061 970 ntBASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC091167.2-201ENST00000579581 588 ntBASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC093512.1-201ENST00000617969 520 ntBASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 AC009093.7-201ENST00000623853 1223 ntBASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-38-2P0DP08 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms