Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.44■□□□□ 0.06
FREM3P0C091 PRSS29P-201ENST00000440800 595 ntBASIC15.44■□□□□ 0.06
FREM3P0C091 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.44■□□□□ 0.06
FREM3P0C091 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FREM3P0C091 AC064836.3-201ENST00000607928 673 ntBASIC15.44■□□□□ 0.06
FREM3P0C091 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.44■□□□□ 0.06
FREM3P0C091 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
FREM3P0C091 AD000864.1-201ENST00000624076 2295 ntBASIC15.44■□□□□ 0.06
FREM3P0C091 PI4KAP1-204ENST00000612579 1703 ntBASIC15.44■□□□□ 0.06
FREM3P0C091 AC084018.2-201ENST00000613093 2607 ntBASIC15.44■□□□□ 0.06
FREM3P0C091 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
FREM3P0C091 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.44■□□□□ 0.06
FREM3P0C091 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.44■□□□□ 0.06
FREM3P0C091 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FREM3P0C091 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.43■□□□□ 0.06
FREM3P0C091 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
FREM3P0C091 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
FREM3P0C091 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 AL078644.1-201ENST00000609881 752 ntBASIC15.43■□□□□ 0.06
FREM3P0C091 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.43■□□□□ 0.06
FREM3P0C091 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.43■□□□□ 0.06
FREM3P0C091 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.43■□□□□ 0.06
FREM3P0C091 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.43■□□□□ 0.06
FREM3P0C091 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.43■□□□□ 0.06
FREM3P0C091 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.43■□□□□ 0.06
FREM3P0C091 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.43■□□□□ 0.06
FREM3P0C091 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 AC006538.3-201ENST00000612495 578 ntBASIC15.43■□□□□ 0.06
FREM3P0C091 REXO1L3P-201ENST00000622202 1288 ntBASIC15.43■□□□□ 0.06
FREM3P0C091 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.43■□□□□ 0.06
FREM3P0C091 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FREM3P0C091 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.43■□□□□ 0.06
FREM3P0C091 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.43■□□□□ 0.06
FREM3P0C091 AC060834.1-201ENST00000443027 2032 ntBASIC15.42■□□□□ 0.06
FREM3P0C091 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 EGFEM1P-202ENST00000431685 1563 ntBASIC15.42■□□□□ 0.06
FREM3P0C091 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
FREM3P0C091 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 IGLL3P-201ENST00000412472 434 ntBASIC15.42■□□□□ 0.06
FREM3P0C091 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
FREM3P0C091 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 PDPK2P-202ENST00000562415 1191 ntBASIC15.42■□□□□ 0.06
FREM3P0C091 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.42■□□□□ 0.06
FREM3P0C091 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.42■□□□□ 0.06
FREM3P0C091 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.42■□□□□ 0.06
FREM3P0C091 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
FREM3P0C091 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.42■□□□□ 0.06
FREM3P0C091 AC093525.9-201ENST00000624961 1746 ntBASIC15.42■□□□□ 0.06
FREM3P0C091 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms