Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 PAWRP1-201ENST00000451083 565 ntBASIC17.63■□□□□ 0.41
CD48P09326 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.63■□□□□ 0.41
CD48P09326 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD48P09326 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.63■□□□□ 0.41
CD48P09326 AL691432.3-201ENST00000621860 400 ntBASIC17.63■□□□□ 0.41
CD48P09326 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CD48P09326 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 TUBB8P12-201ENST00000308911 1335 ntBASIC17.63■□□□□ 0.41
CD48P09326 TUBB7P-202ENST00000428444 1305 ntBASIC17.63■□□□□ 0.41
CD48P09326 TUBB8P7-204ENST00000567960 1332 ntBASIC17.63■□□□□ 0.41
CD48P09326 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.63■□□□□ 0.41
CD48P09326 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.63■□□□□ 0.41
CD48P09326 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CD48P09326 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD48P09326 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.62■□□□□ 0.41
CD48P09326 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.62■□□□□ 0.41
CD48P09326 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.62■□□□□ 0.41
CD48P09326 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.62■□□□□ 0.41
CD48P09326 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 AC107918.4-202ENST00000641623 219 ntBASIC17.62■□□□□ 0.41
CD48P09326 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 HLA-A-202ENST00000376806 1854 ntBASIC17.62■□□□□ 0.41
CD48P09326 AL391256.1-201ENST00000443260 1855 ntBASIC17.62■□□□□ 0.41
CD48P09326 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CD48P09326 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD48P09326 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.62■□□□□ 0.41
CD48P09326 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 HNRNPDP1-201ENST00000439535 754 ntBASIC17.61■□□□□ 0.41
CD48P09326 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.61■□□□□ 0.41
CD48P09326 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD48P09326 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms