Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 COX5BP2-201ENST00000392354 334 ntBASIC19.15■□□□□ 0.66
TPM3P06753 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.15■□□□□ 0.66
TPM3P06753 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.15■□□□□ 0.66
TPM3P06753 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.15■□□□□ 0.66
TPM3P06753 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TPM3P06753 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 AC097374.2-201ENST00000618617 1306 ntBASIC19.15■□□□□ 0.66
TPM3P06753 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TPM3P06753 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TPM3P06753 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TPM3P06753 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TPM3P06753 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TPM3P06753 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 AC092850.2-201ENST00000623821 2697 ntBASIC19.14■□□□□ 0.65
TPM3P06753 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.14■□□□□ 0.65
TPM3P06753 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.14■□□□□ 0.65
TPM3P06753 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 IGHGP-201ENST00000390555 1178 ntBASIC19.14■□□□□ 0.65
TPM3P06753 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.14■□□□□ 0.65
TPM3P06753 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 AC140113.3-201ENST00000605663 199 ntBASIC19.14■□□□□ 0.65
TPM3P06753 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.14■□□□□ 0.65
TPM3P06753 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 AC079602.3-201ENST00000623931 403 ntBASIC19.14■□□□□ 0.65
TPM3P06753 PAUPAR-201ENST00000630360 2965 ntBASIC19.14■□□□□ 0.65
TPM3P06753 AL031432.5-201ENST00000641059 760 ntBASIC19.14■□□□□ 0.65
TPM3P06753 AP006294.2-201ENST00000641667 209 ntBASIC19.14■□□□□ 0.65
TPM3P06753 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
TPM3P06753 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.14■□□□□ 0.65
TPM3P06753 AC068418.2-201ENST00000577309 3703 ntBASIC19.14■□□□□ 0.65
TPM3P06753 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TPM3P06753 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TPM3P06753 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.14■□□□□ 0.65
TPM3P06753 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.14■□□□□ 0.65
TPM3P06753 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM3P06753 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 AC079328.2-201ENST00000561241 3354 ntBASIC19.13■□□□□ 0.65
TPM3P06753 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TPM3P06753 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 HLA-F-220ENST00000434407 884 ntBASIC19.13■□□□□ 0.65
TPM3P06753 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms